Doctor of Philosophy, The Ohio State University, 2015, Comparative and Veterinary Medicine
Human enteric caliciviruses are a leading cause of viral gastroenteritis in humans of all ages worldwide. However, most attempts to grow human enteric caliciviruses in routine cell cultures have failed. This has hampered research on pathogenesis, immunity, virus inactivation, and the development of antivirals and vaccines. Porcine sapovirus (PoSaV) Cowden strain causes diarrhea in pigs, and is one of only a few culturable enteric caliciviruses. The PoSaV Cowden strain was adapted to a porcine kidney cell line, LLC-PK, after serially passaging in gnotobiotic pigs and in primary porcine kidney cells. Compared with the wild-type (WT) PoSaV Cowden strain, the tissue culture-adapted (TC) PoSaV has eight conserved amino acid substitutions: two in the RNA-dependent RNA polymerase (RdRp) region and six in the capsid protein (VP1) region. By using a reverse genetics system for the TC Cowden strain, pCV4A, four (178, 289, 324, and 328) amino acid substitutions in the VP1, but not the substitutions in the RdRp region, were identified to be critical for the cell culture adaptation of PoSaV Cowden strain. Two (291 and 295) substitutions in the VP1 enhanced virus replication in vitro, but reduced virus replication in vivo. In addition, the 291 and 295 revertants induced higher serum and mucosal antibody responses than TC PoSaV Cowden strain. Three dimensional (3D) structural analysis of the VP1 showed that residue 178 was located in the shell domain near the dimer-dimer interface, which may affect VP1 assembly and oligomerization; residues 289, 291, 324, and 328 were located at the protruding subdomain 2 (P2), which may influence virus binding to the cellular receptors; residue 295 was located at the interface of two monomeric VP1 proteins, which may influence VP1 dimerization.
Next, these findings were tested using other Cowden-like genogroup III PoSaVs. The complete genomes of two Cowden-like PoSaV strains, WT JJ259 and WT LL14 were sequenced and compared with those of Cowden (open full item for complete abstract)
Committee: Linda Saif Ph.D. (Advisor); Qiuhong Wang Ph.D. (Advisor); Gireesh Rajashekara Ph.D. (Committee Member); Armando Hoet Ph.D. (Committee Member)
Subjects: Molecular Biology; Pathology; Virology