PHD, Kent State University, 2007, College of Biomedical Sciences
Viral infection induces expression and activation of several genes involved directly or indirectly in antiviral defense. Protein kinase R (PKR), a Ser/Thr kinase induced by interferons and activated by double-stranded RNA (dsRNA) is a crucial component in mediating cellular antiviral action. Following activation by dsRNA, PKR initiates antiviral defense by inhibiting translation and inducing apoptosis. Apart from its role in translational inhibition, PKR has been implicated as a key integrator of many other signaling pathways stimulated by lipopolysaccharide, cytokines, growth factors and different types of cellular stresses. In order to define PKR dependent genes to better elucidate its physiological function, gene expression profiling following dsRNA treatment was performed on wild-type (wt) and PKR knockout (pkr-ko) spleen derived macrophage cell lines (SM) cells). The microarray results identified several novel PKR-dependent genes whose expression is induced by dsRNA treatment of mouse macrophages. The expression of early growth response-1 (Egr-1), an immediate early gene was highly induced in a PKR dependent manner on dsRNA treatment. NF-kB was determined to be a key component in regulation of the dsRNA mediated PKR-dependent, Egr-1 induction.Earlier reports have implied a role for PKR in induction and activation of AP-1 family members including c-Fos and ATF2 in response to different stimuli. A novel role for PKR in up-regulation of the AP-1 transcription factor c-Jun in response to dsRNA is documented in this thesis. Depending on the cell type, dsRNA mediated c-Jun induction is shown to be dependent on c-Jun NH2-terminal kinase JNK or extracellular signal related kinase ERK. Additionally, a role for c-AMP response element binding protein CREB is implicated in dsRNA mediated c-Jun induction. Importantly, activation of CREB, in response to dsRNA was impaired in the absence of PKR in SM cells.A role for PKR in the regulation of different pro-inflammatory cytokin (open full item for complete abstract)
Committee: Bryan Williams (Advisor)
Subjects: Biology, Molecular