Doctor of Philosophy, The Ohio State University, 2020, Plant Pathology
The characterization of plant germplasm has tremendous potential to help address the many challenges that the field of plant health is facing, such as climate change continuously modifying the regions of previously known disease occurrence. The worldwide trade of the plant genus Phlox represents an important revenue for the horticultural industry. However, Phlox species are highly susceptible to the fungal disease powdery mildew (PM), and infected materials shipping across borders accelerate the risk of disease spread. Through collaboration with laboratories in the U.S., we investigated the genotypic and phenotypic diversity of a PM population to better understand its capacity to adapt to new environments and new resistant hosts. To do this, we developed tools to grow and study PM pathogens of Phlox in vitro, and then used whole genome comparison and multilocus sequence typing (MLST) analysis to study the genetic structure of the population. Additionally, we explored Phlox germplasm diversity to identify a range of plant responses to PM infection by comparing disease severity progression and length of latency period of spore production across a combination of Phlox species and PM isolates in vitro. Consistent with the literature, our results suggest that compared to most plant pathogenic fungi in the Ascomycota, Golovinomyces magnicellulatus, causal agent of PM, has larger genomes (about 130 Mb) with high repetitive content (about 40%) and a fewer number of protein-coding genes (about 8000). We found a lack of population structure and genetic diversity, despite diverse phenotypic responses to Phlox germplasm screening. Interestingly, we identified 7 putative secreted proteins, which are predicted to be involved in the infection process, that are differently distributed between the G. magnicellulatus genomes analyzed. We hypothesize that variation in predicted secreted proteins is at the basis of the differences observed in genetic and phenotypic diversity. Our resul (open full item for complete abstract)
Committee: Francesca Hand PhD (Advisor); Pablo Jourdan PhD (Committee Member); Thomas Mitchell PhD (Committee Member); Pierce Paul PhD (Committee Member); Jason Slot PhD (Committee Member)
Subjects: Plant Pathology